Package: metap 1.11

metap: Meta-Analysis of Significance Values

The canonical way to perform meta-analysis involves using effect sizes. When they are not available this package provides a number of methods for meta-analysis of significance values including the methods of Edgington, Fisher, Lancaster, Stouffer, Tippett, and Wilkinson; a number of data-sets to replicate published results; and routines for graphical display.

Authors:Michael Dewey [aut, cre]

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metap.pdf |metap.html✨
metap/json (API)
NEWS

# Install 'metap' in R:

install.packages('metap', repos = c('https://deweyme.r-universe.dev', 'https://cloud.r-project.org'))

Datasets:

dat.metap - Example data

On CRAN:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

18 exports 3.84 score 29 dependencies 14 dependents 15 mentions 544 scripts 5.2k downloads

Last updated 2 months agofrom:98c03eeed1. Checks:OK: 7. Indexed: yes.

Target	Result	Date
Doc / Vignettes	OK	Sep 10 2024
R-4.5-win	OK	Sep 10 2024
R-4.5-linux	OK	Sep 10 2024
R-4.4-win	OK	Sep 10 2024
R-4.4-mac	OK	Sep 10 2024
R-4.3-win	OK	Sep 10 2024
R-4.3-mac	OK	Sep 10 2024

Exports:albatros allmetap invchisq invt logitp maximump meanp meanz minimump plotp schweder sumlog sump sumz truncated two2one votep wilkinsonp

Dependencies:Biobase BiocGenerics codetools DEoptimR lattice MASS mathjaxr Matrix MatrixModels mnormt multcomp multtest mutoss mvtnorm numDeriv plotrix qqconf quantreg rbibutils Rcpp Rdpack robustbase sandwich sn SparseM survival TFisher TH.data zoo

Comparison of methods in the metap package

Rendered fromcompare.Rnwusingutils::Sweaveon Sep 10 2024.

Last update: 2021-11-05
Started: 2019-02-06

Introduction to the metap package

Rendered frommetap.Rnwusingutils::Sweaveon Sep 10 2024.

Last update: 2022-02-10
Started: 2016-04-07

Plotting in the metap package

Rendered fromplotmetap.Rnwusingutils::Sweaveon Sep 10 2024.

Last update: 2023-10-09
Started: 2022-02-10

Citation

Readme and manuals

Help Manual

Help page	Topics
Meta-Analysis of Significance Values	metap-package metap
Albatros plot	albatros
Carry out all or some of the methods in the package	allmetap print.allmetap
Example data	beckerp cholest dat.metap edgington mourning naep rosenthal teachexpect validity
Combine p values using the inverse chi squared method	invchisq Lancaster's method print.invchisq
Combine p values using the inverse t method	invt print.invt
Combine p values using the logit method	logitp print.logitp
Combine p values by the mean p method	meanp print.meanp
Combine p values using the mean z method	meanz print.meanz
Q-Q plot of p-values	plotp
Schweder and Spjotvoll plot	schweder
Combine p-values by the sum of logs (Fisher's) method	chi-square (2) method Fisher's method print.sumlog sumlog
Combine p-values using the sum of p (Edgington's) method	Edgington's method print.sump sump
Combine p-values using the sum of z (Stouffer's) method	print.sumz Stouffer's method Sum of normals method sumz
Truncated product methods	plot.truncated print.truncated summary.truncated truncated
Convert two-sided p-values to one-sided	two2one
Combine p-values by the vote counting method	print.votep votep
Combine p-values using Wilkinson's method	maximump minimump print.maximump print.minimump print.wilkinsonp Tippett's method wilkinsonp