Package: metap 1.11

metap: Meta-Analysis of Significance Values

The canonical way to perform meta-analysis involves using effect sizes. When they are not available this package provides a number of methods for meta-analysis of significance values including the methods of Edgington, Fisher, Lancaster, Stouffer, Tippett, and Wilkinson; a number of data-sets to replicate published results; and routines for graphical display.

Authors:Michael Dewey [aut, cre]

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metap.pdf |metap.html
metap/json (API)
NEWS

# Install 'metap' in R:
install.packages('metap', repos = c('https://deweyme.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Datasets:

On CRAN:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

7.93 score 14 packages 650 scripts 5.2k downloads 15 mentions 18 exports 30 dependencies

Last updated 4 months agofrom:98c03eeed1. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 09 2024
R-4.5-winOKNov 09 2024
R-4.5-linuxOKNov 09 2024
R-4.4-winOKNov 09 2024
R-4.4-macOKNov 09 2024
R-4.3-winOKNov 09 2024
R-4.3-macOKNov 09 2024

Exports:albatrosallmetapinvchisqinvtlogitpmaximumpmeanpmeanzminimumpplotpschwedersumlogsumpsumztruncatedtwo2onevotepwilkinsonp

Dependencies:BiobaseBiocGenericscodetoolsDEoptimRgenericslatticeMASSmathjaxrMatrixMatrixModelsmnormtmultcompmulttestmutossmvtnormnumDerivplotrixqqconfquantregrbibutilsRcppRdpackrobustbasesandwichsnSparseMsurvivalTFisherTH.datazoo

Comparison of methods in the metap package

Rendered fromcompare.Rnwusingutils::Sweaveon Nov 09 2024.

Last update: 2021-11-05
Started: 2019-02-06

Introduction to the metap package

Rendered frommetap.Rnwusingutils::Sweaveon Nov 09 2024.

Last update: 2022-02-10
Started: 2016-04-07

Plotting in the metap package

Rendered fromplotmetap.Rnwusingutils::Sweaveon Nov 09 2024.

Last update: 2023-10-09
Started: 2022-02-10

Readme and manuals

Help Manual

Help pageTopics
Meta-Analysis of Significance Valuesmetap-package metap
Albatros plotalbatros
Carry out all or some of the methods in the packageallmetap print.allmetap
Example databeckerp cholest dat.metap edgington mourning naep rosenthal teachexpect validity
Combine p values using the inverse chi squared methodinvchisq Lancaster's method print.invchisq
Combine p values using the inverse t methodinvt print.invt
Combine p values using the logit methodlogitp print.logitp
Combine p values by the mean p methodmeanp print.meanp
Combine p values using the mean z methodmeanz print.meanz
Q-Q plot of p-valuesplotp
Schweder and Spjotvoll plotschweder
Combine p-values by the sum of logs (Fisher's) methodchi-square (2) method Fisher's method print.sumlog sumlog
Combine p-values using the sum of p (Edgington's) methodEdgington's method print.sump sump
Combine p-values using the sum of z (Stouffer's) methodprint.sumz Stouffer's method Sum of normals method sumz
Truncated product methodsplot.truncated print.truncated summary.truncated truncated
Convert two-sided p-values to one-sidedtwo2one
Combine p-values by the vote counting methodprint.votep votep
Combine p-values using Wilkinson's methodmaximump minimump print.maximump print.minimump print.wilkinsonp Tippett's method wilkinsonp